<REPOSITORY>
    <SOFTPKG NAME="GD-SVG" VERSION="0.25">
        <PROVIDE NAME="GD::SVG" VERSION="0.25" />
        <ABSTRACT>Seamlessly enable SVG output from scripts written using GD</ABSTRACT>
        <AUTHOR>Todd Harris &lt;harris@cshl.org&gt;</AUTHOR>
        <IMPLEMENTATION>
            <CODEBASE HREF="GD-SVG-0.25-ppm.tar.gz" />
            <REQUIRE NAME="GD::" VERSION="" />
            <REQUIRE NAME="SVG::" VERSION="" />
        </IMPLEMENTATION>
    </SOFTPKG>

    <SOFTPKG NAME="SVG-Graph" VERSION="0.01">
        <PROVIDE NAME="SVG::Graph" VERSION="0.01" />
        <ABSTRACT>Visualize your data in Scalable Vector Graphics (SVG) format.</ABSTRACT>
        <AUTHOR>Allen Day &lt;allenday@ucla.edu&gt;, Chris To &lt;crsto@ucla.edu&gt;</AUTHOR>
        <IMPLEMENTATION>
            <CODEBASE HREF="SVG-Graph-0.01-ppm.tar.gz" />
            <REQUIRE NAME="Math::Derivative" VERSION="" />
            <REQUIRE NAME="Math::Spline" VERSION="" />
            <REQUIRE NAME="SVG::" VERSION="2.27" />
            <REQUIRE NAME="Statistics::Descriptive" VERSION="2.6" />
            <REQUIRE NAME="Tree::DAG_Node" VERSION="1.04" />
        </IMPLEMENTATION>
    </SOFTPKG>

    <SOFTPKG NAME="Bio-ASN1-EntrezGene" VERSION="1.09">
        <PROVIDE NAME="Bio::ASN1::EntrezGene" VERSION="1.09" />
        <ABSTRACT></ABSTRACT>
        <AUTHOR>Mingyi Liu (mingyi.liu[at]gpc-biotech.com)</AUTHOR>
        <IMPLEMENTATION>
            <CODEBASE HREF="Bio-ASN1-EntrezGene-1.09-ppm.tar.gz" />
        </IMPLEMENTATION>
    </SOFTPKG>

    <SOFTPKG NAME="Class-AutoClass" VERSION="1.01">
        <PROVIDE NAME="Class::AutoClass" VERSION="1.01" />
        <ABSTRACT></ABSTRACT>
        <AUTHOR>Christopher Charles Cavnor</AUTHOR>
        <IMPLEMENTATION>
            <CODEBASE HREF="Class-AutoClass-1.01-ppm.tar.gz" />
            <REQUIRE NAME="IO::Scalar" VERSION="" />
            <REQUIRE NAME="Storable::" VERSION="" />
            <REQUIRE NAME="Test::Deep" VERSION="" />
            <REQUIRE NAME="Test::More" VERSION="" />
        </IMPLEMENTATION>
    </SOFTPKG>

    <SOFTPKG NAME="Graph" VERSION="0.80">
        <TITLE>Graph</TITLE>
        <ABSTRACT></ABSTRACT>
        <AUTHOR></AUTHOR>
        <PROVIDE NAME="Graph::" VERSION="0.80" />
        <IMPLEMENTATION>
            <CODEBASE HREF="Graph-0.80-ppm.tar.gz" />
            <REQUIRE NAME="Heap::" VERSION="" />
            <REQUIRE NAME="List::Util" VERSION="" />
            <REQUIRE NAME="Math::Complex" VERSION="" />
            <REQUIRE NAME="Scalar::Util" VERSION="" />
            <REQUIRE NAME="Test::More" VERSION="" />
        </IMPLEMENTATION>
    </SOFTPKG>

    <SOFTPKG NAME="GraphViz" VERSION="2.04">
        <TITLE>GraphViz</TITLE>
        <ABSTRACT>Interface to the GraphViz graphing tool</ABSTRACT>
        <AUTHOR>Leon Brocard &lt;acme@astray.com&gt;</AUTHOR>
        <PROVIDE NAME="GraphViz::" VERSION="2.04" />
        <IMPLEMENTATION>
            <REQUIRE NAME="IPC::Run" VERSION="0.6" />
            <REQUIRE NAME="Test::More" VERSION="" />
            <CODEBASE HREF="GraphViz-2.04.tar.gz" />
        </IMPLEMENTATION>
    </SOFTPKG>

    <SOFTPKG NAME="BioPerl" VERSION="1.6.1" DATE="2009-9-29">
        <TITLE>BioPerl</TITLE>
        <ABSTRACT>Bioinformatics Toolkit</ABSTRACT>
        <AUTHOR>BioPerl Team &lt;bioperl-l@bioperl.org&gt;</AUTHOR>
        <PROVIDE NAME="BioPerl::" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AnalysisI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AnalysisParserI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AnalysisResultI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AnnotatableI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AnnotationCollectionI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AnnotationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::ClusterI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::ClusterIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DasI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DBLinkContainerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DescribableI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureHolderI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::HandlerBaseI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::IdCollectionI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::IdentifiableI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LocatableSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LocationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::MapIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::ParameterBaseI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Perl" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PrimarySeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PrimarySeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PullParserI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Range" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::RangeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchDist" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqAnalysisParserI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeatureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqUtils" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SimpleAlign" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SimpleAnalysisI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Species" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Taxon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Taxonomy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::UpdateableSeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::WebAgent" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Align::AlignI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Align::DNAStatistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Align::PairwiseStatistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Align::ProteinStatistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Align::StatisticsI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Align::Utilities" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::arp" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::bl2seq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::clustalw" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::emboss" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::largemultifasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::maf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::mase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::mega" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::meme" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::metafasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::msf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::nexus" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::pfam" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::phylip" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::po" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::proda" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::prodom" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::psi" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::selex" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::stockholm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::xmfa" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::AlignIO::Handler::GenericAlignHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::AnnotationFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::Collection" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::Comment" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::DBLink" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::OntologyTerm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::Reference" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::Relation" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::SimpleValue" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::StructuredValue" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::TagTree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::Target" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::Tree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Annotation::TypeManager" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::Contig" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::ContigAnalysis" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::Scaffold" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::ScaffoldI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::Singlet" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::IO::ace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::IO::phrap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::IO::tigr" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Assembly::Tools::ContigSpectrum" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Article" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::BiblioBase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Book" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::BookArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Journal" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::JournalArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::MedlineArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::MedlineBook" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::MedlineBookArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::MedlineJournal" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::MedlineJournalArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Organisation" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Patent" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Person" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Proceeding" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Provider" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::PubmedArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::PubmedBookArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::PubmedJournalArticle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Ref" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Service" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::TechReport" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::Thesis" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::WebResource" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::IO::medline2ref" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::IO::medlinexml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::IO::pubmed2ref" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Biblio::IO::pubmedxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Cluster::ClusterFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Cluster::FamilyI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Cluster::SequenceFamily" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Cluster::UniGene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Cluster::UniGeneI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::ClusterIO::dbsnp" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::ClusterIO::unigene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::CodonUsage::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::CodonUsage::Table" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Chain" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Collection" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::ExtrapolatingPair" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::GeneMapper" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Graph" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::MapperI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Pair" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Result" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::ResultI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Utils" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Result::Gap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Coordinate::Result::Match" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Das::FeatureTypeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Das::SegmentI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Ace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::BiblioI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::BioFetch" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::CUTG" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::DBFetch" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::EMBL" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::EntrezGene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::EUtilities" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Expression" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Failover" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::FileCache" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GenBank" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GenericWebAgent" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GenPept" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::HIV" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::InMemoryCache" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::LocationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::MeSH" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::NCBIHelper" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Qual" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::QueryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::RandomAccessI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::ReferenceI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::RefSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Registry" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqHound" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqVersion" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SwissProt" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Taxonomy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::TFBS" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Universal" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::UpdateableSeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::WebDBSeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Biblio::biofetch" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Biblio::eutils" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Biblio::soap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Expression::geo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat::BDB" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat::BinarySearch" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat::BDB::embl" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat::BDB::fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat::BDB::genbank" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Flat::BDB::swiss" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Featname" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Feature" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Homol" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::RelSegment" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Segment" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Typename" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::ace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::berkeleydb" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::biofetch" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::biofetch_oracle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::memory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::berkeleydb::iterator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::caching_handle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::iterator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::mysql" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::mysqlace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::mysqlcmap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::mysqlopt" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::oracle" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::oracleace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::pg" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::dbi::pg_fts" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::memory::feature_serializer" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Adaptor::memory::iterator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::alignment" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::clone" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::coding" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::gene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::match" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::none" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::orf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::processed_transcript" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::so_transcript" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::transcript" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_acembly" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_ensgene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_genscan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_refgene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_sanger22" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_sanger22pseudo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_softberry" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_twinscan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Aggregator::ucsc_unigene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Util::Binning" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::GFF::Util::Rearrange" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::HIV::HIVAnnotProcessor" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::HIV::HIVQueryHelper" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Query::GenBank" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Query::HIVQuery" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Query::WebQuery" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::NormalizedFeature" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::NormalizedFeatureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::NormalizedTableFeatureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Segment" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::bdb" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::berkeleydb" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::berkeleydb3" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::FeatureFileLoader" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::GFF2Loader" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::GFF3Loader" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::Loader" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::LoadHelper" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::memory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::DBI::Iterator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::DBI::mysql" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::DBI::Pg" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqFeature::Store::DBI::SQLite" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::SeqVersion::gi" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Taxonomy::entrez" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Taxonomy::flatfile" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::Taxonomy::list" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::DB::TFBS::transfac_pro" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Event::EventGeneratorI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Event::EventHandlerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::Contact" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::DataSet" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::FeatureGroup" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::FeatureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::Platform" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::ProbeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::Sample" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::FeatureGroup::FeatureGroupMas50" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Expression::FeatureSet::FeatureSetMas50" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::AnalysisI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::ApplicationFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::DriverFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::FTLocationFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::LocationFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::MapFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::ObjectBuilderI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::ObjectFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::ObjectFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::SeqAnalysisParserFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::SeqAnalysisParserFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::SequenceFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::SequenceProcessorI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::SequenceStreamI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Factory::TreeFactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO::bed" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO::gff" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO::gtf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO::interpro" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO::ptt" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::FeatureIO::vecscreen_simple" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Abstract" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::AbstractSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Blast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::BlastTable" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::EMBL" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Fastq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::GenBank" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Hmmer" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Qual" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Stockholm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::SwissPfam" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Index::Swissprot" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::AARange" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Chain" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::ChainI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::DNA" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Exon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Gene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Intron" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Mutation" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Mutator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Prim_Transcript" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Range" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Repeat_Region" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Repeat_Unit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::SeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Transcript" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::Translation" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::IO::BioPerl" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::LiveSeq::IO::Loader" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::Atomic" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::AvWithinCoordPolicy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::CoordinatePolicyI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::Fuzzy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::FuzzyLocationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::NarrowestCoordPolicy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::Simple" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::Split" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::SplitLocationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Location::WidestCoordPolicy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Clone" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Contig" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::CytoMap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::CytoMarker" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::CytoPosition" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::EntityI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::FPCMarker" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Gene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::GeneMap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::GenePosition" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::GeneRelative" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::LinkageMap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::LinkagePosition" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::MapI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Mappable" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::MappableI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Marker" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::MarkerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Microsatellite" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::OrderedPosition" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::OrderedPositionWithDistance" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Physical" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Position" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::PositionHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::PositionHandlerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::PositionI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::PositionWithSequence" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Prediction" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::Relative" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::RelativeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::SimpleMap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Map::TranscriptionFactor" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::MapIO::fpc" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::MapIO::mapmaker" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::Generic" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::MatrixI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::Mlagan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PhylipDist" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::Scoring" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::IO::mlagan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::IO::phylip" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::IO::scoring" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::InstanceSite" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::InstanceSiteI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::ProtMatrix" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::ProtPsm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::Psm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::PsmHeader" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::PsmHeaderI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::PsmI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::SiteMatrix" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::SiteMatrixI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::IO::mast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::IO::masta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::IO::meme" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::IO::psiblast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Matrix::PSM::IO::transfac" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::MolEvol::CodonModel" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::DocumentRegistry" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::GOterm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::InterProTerm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::OBOEngine" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::OBOterm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::Ontology" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::OntologyEngineI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::OntologyI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::OntologyStore" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::Path" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::PathI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::Relationship" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::RelationshipFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::RelationshipI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::RelationshipType" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::SimpleOntologyEngine" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::Term" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::TermFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::TermI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::SimpleGOEngine::GraphAdaptor" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Ontology::SimpleGOEngine::GraphAdaptor02" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::dagflat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::goflat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::InterProParser" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::obo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::simplehierarchy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::soflat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::Handlers::BaseSAXHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::Handlers::InterPro_BioSQL_Handler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::OntologyIO::Handlers::InterProHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::Correlate" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::Measure" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::Phenotype" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::PhenotypeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::MeSH::Term" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::MeSH::Twig" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::OMIM::MiniMIMentry" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::OMIM::OMIMentry" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::OMIM::OMIMentryAllelicVariant" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Phenotype::OMIM::OMIMparser" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::Factory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::FactoryX" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::GraphViz" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::muVector" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::RandomFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::TreeFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::TreeFactoryMulti" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PhyloNetwork::TreeFactoryX" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Genotype" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::GenotypeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::HtSNP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Individual" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::IndividualI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Marker" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::MarkerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::PopStats" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Population" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::PopulationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Statistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::TagHaplotype" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Utilities" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::IO::csv" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::IO::hapmap" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::IO::phase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::IO::prettybase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Simulation::Coalescent" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::PopGen::Simulation::GeneticDrift" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::Analysis" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::Enzyme" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::EnzymeCollection" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::EnzymeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::Enzyme::MultiCut" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::Enzyme::MultiSite" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::IO::bairoch" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::IO::base" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::IO::itype2" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::IO::prototype" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Restriction::IO::withrefm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Build" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Exception" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::HTTPget" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Root" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::RootI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Storable" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Test" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Utilities" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Version" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Root::Test::Warn" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::BlastStatistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::BlastUtils" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::DatabaseI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::GenericDatabase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::GenericStatistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Processor" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::SearchUtils" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::StatisticsI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::BlastHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::BlastPullHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::Fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::GenericHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::HitFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::HitI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::HMMERHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::HmmpfamHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::ModelHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::PsiBlastHit" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Hit::PullHitI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::BlastHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::BlastPullHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::FastaHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::GenericHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::HMMERHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::HmmpfamHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::HSPFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::HSPI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::ModelHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::PsiBlastHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::PSLHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::PullHSPI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::HSP::WABAHSP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Iteration::GenericIteration" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Iteration::IterationI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::BlastPullResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::BlastResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::CrossMatchResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::GenericResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::HMMERResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::HmmpfamResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::PullResultI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::ResultFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::ResultI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Result::WABAResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Tiling::MapTileUtils" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Tiling::MapTiling" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Search::Tiling::TilingI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::axt" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::blast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::blast_pull" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::blasttable" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::blastxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::cross_match" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::erpin" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::EventHandlerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::exonerate" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::FastHitEventBuilder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::gmap_f9" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::hmmer" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::hmmer_pull" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::infernal" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::IteratedSearchResultEventBuilder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::megablast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::psl" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::rnamotif" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::SearchResultEventBuilder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::SearchWriterI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::sim4" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::waba" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::wise" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::BSMLResultWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::GbrowseGFF" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::HitTableWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::HSPTableWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::HTMLResultWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::ResultTableWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::Writer::TextResultWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::XML::BlastHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SearchIO::XML::PsiBlastHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::BaseSeqProcessor" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::EncodedSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::LargeLocatableSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::LargePrimarySeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::LargeSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::LargeSeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::Meta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::MetaI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::PrimaryQual" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::PrimedSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::QualI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::Quality" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::RichSeq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::RichSeqI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::SeqBuilder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::SeqFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::SeqFastaSpeedFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::SequenceTrace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::SeqWithQuality" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::TraceI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Seq::Meta::Array" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqEvolution::DNAPoint" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqEvolution::EvolutionI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqEvolution::Factory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Annotated" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::AnnotationAdaptor" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Collection" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::CollectionI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Computation" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::FeaturePair" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Generic" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Lite" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::PositionProxy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Primer" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Similarity" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::SimilarityPair" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::TypedSeqFeatureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::Exon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::ExonI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::GeneStructure" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::GeneStructureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::Intron" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::NC_Feature" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::Poly_A_site" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::Promoter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::Transcript" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::TranscriptI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Gene::UTR" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::SiRNA::Oligo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::SiRNA::Pair" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Tools::FeatureNamer" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Tools::IDHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Tools::TypeMapper" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqFeature::Tools::Unflattener" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::abi" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::ace" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::agave" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::alf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::asciitree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::bsml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::bsml_sax" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::chadoxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::chaos" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::chaosxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::ctf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::embl" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::embldriver" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::entrezgene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::excel" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::exp" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::fasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::fastq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::flybase_chadoxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::FTHelper" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::game" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::gbdriver" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::gcg" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::genbank" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::interpro" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::kegg" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::largefasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::lasergene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::locuslink" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::metafasta" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::MultiFile" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::phd" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::pir" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::pln" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::qual" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::raw" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::scf" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::strider" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::swiss" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::swissdriver" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::tab" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::table" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::tigr" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::tigrxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::tinyseq" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::ztr" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::game::featHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::game::gameHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::game::gameSubs" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::game::gameWriter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::game::seqHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::Handler::GenericRichSeqHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::SeqIO::tinyseq::tinyseqHandler" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::Atom" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::Chain" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::Entry" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::Model" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::Residue" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::StructureI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::IO::pdb" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::SecStr::DSSP::Res" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Structure::SecStr::STRIDE::Res" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Symbol::Alphabet" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Symbol::AlphabetI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Symbol::DNAAlphabet" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Symbol::ProteinAlphabet" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Symbol::Symbol" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Symbol::SymbolI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Taxonomy::FactoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Taxonomy::Node" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Taxonomy::Taxon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Taxonomy::Tree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::AlignFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::AnalysisResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Blat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::CodonTable" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Coil" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::dpAlign" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::ECnumber" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EPCR" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Eponine" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::ERPIN" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Est2Genome" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::ESTScan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Fgenesh" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::FootPrinter" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Gel" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Geneid" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Genemark" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Genewise" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Genomewise" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Genscan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::GFF" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Glimmer" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Grail" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::GuessSeqFormat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Hmmpfam" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Infernal" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::ipcress" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::isPcr" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::IUPAC" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Lucy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Match" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::MZEF" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::OddCodes" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::pICalculator" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Primer3" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Prints" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Profile" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Promoterwise" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::PrositeScan" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Protparam" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Pseudowise" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::pSW" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::QRNA" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::RandomDistFunctions" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::RepeatMasker" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::RNAMotif" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Seg" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SeqPattern" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SeqStats" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SeqWords" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Sigcleave" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Signalp" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SiRNA" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::TandemRepeatsFinder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::TargetP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Tmhmm" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::tRNAscanSE" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Alignment::Consed" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Alignment::Trim" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::SimpleAnalysisBase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::DNA::ESEfinder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::Domcut" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::ELM" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::GOR4" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::HNN" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::Mitoprot" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::NetPhos" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::Scansite" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Analysis::Protein::Sopma" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EMBOSS::Palindrome" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Cookie" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::EUtilDataI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::EUtilParameters" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::History" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::HistoryI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Info" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Link" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Query" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Summary" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Info::FieldInfo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Info::LinkInfo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Link::LinkSet" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Link::UrlLink" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Query::GlobalQuery" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Summary::DocSum" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Summary::Item" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::EUtilities::Summary::ItemContainerI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::HMMER::Domain" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::HMMER::Results" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::HMMER::Set" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::Gerp" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::Gumby" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::Molphy" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::PAML" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::Molphy::Result" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::PAML::ModelResult" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::PAML::Result" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Phylo::Phylip::ProtDist" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Prediction::Exon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Prediction::Gene" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Primer::AssessorI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Primer::Feature" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Primer::Pair" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Primer::Assessor::Base" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::GenericParameters" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::ParametersI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::RemoteBlast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::StandAloneBlast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::StandAloneNCBIBlast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::StandAloneWUBlast" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Run::WrapperBase" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SeqPattern::Backtranslate" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Signalp::ExtendedSignalp" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Sim4::Exon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Sim4::Results" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SiRNA::Ruleset::saigo" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::SiRNA::Ruleset::tuschl" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Spidey::Exon" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tools::Spidey::Results" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::AlleleNode" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::AnnotatableNode" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::Compatible" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::DistanceFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::Node" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::NodeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::NodeNHX" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::RandomFactory" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::Statistics" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::Tree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::TreeFunctionsI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::TreeI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Tree::Draw::Cladogram" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::cluster" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::lintree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::newick" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::nexus" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::nhx" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::pag" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::phyloxml" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::svggraph" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::tabtree" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::TreeIO::TreeEventBuilder" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::AAChange" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::AAReverseMutate" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::Allele" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::DNAMutation" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::IO" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::RNAChange" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::SeqDiff" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::SNP" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::VariantI" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::IO::flat" VERSION="1.006001"/>
        <PROVIDE NAME="Bio::Variation::IO::xml" VERSION="1.006001"/>
        <IMPLEMENTATION>
            <CODEBASE HREF="BioPerl-1.6.1-ppm.tar.gz"/>
            <REQUIRE NAME="Bundle::BioPerl::Core" VERSION="1.006001"/>
        </IMPLEMENTATION>
    </SOFTPKG>
    
    <SOFTPKG NAME="Bundle-BioPerl-Core" VERSION="1.6.1" DATE="2009-9-29">
        <TITLE>Bundle::BioPerl::Core</TITLE>
        <ABSTRACT>Bundle of pre-requisites for BioPerl</ABSTRACT>
        <AUTHOR>BioPerl Team &lt;bioperl-l@bioperl.org&gt;</AUTHOR>
        <PROVIDE NAME="Bundle::BioPerl::Core" VERSION="1.006001"/>
        <IMPLEMENTATION>
            <CODEBASE HREF="Bundle-BioPerl-Core-1.6.1-ppm.tar.gz"/>
            <REQUIRE NAME="Scalar::Util" VERSION=""/>
            <REQUIRE NAME="IO::String" VERSION=""/>
            <REQUIRE NAME="Data::Stag" VERSION="0.11"/>
            <REQUIRE NAME="DB_File::" VERSION=""/>
            <REQUIRE NAME="ExtUtils::Manifest" VERSION="1.52"/>
            <REQUIRE NAME="XML::SAX" VERSION="0.15"/>
            <REQUIRE NAME="Spreadsheet::ParseExcel" VERSION=""/>
            <REQUIRE NAME="Ace::" VERSION=""/>
            <REQUIRE NAME="Math::Random" VERSION=""/>
            <REQUIRE NAME="URI::Escape" VERSION=""/>
            <REQUIRE NAME="XML::Simple" VERSION=""/>
            <REQUIRE NAME="Graph::" VERSION=""/>
            <REQUIRE NAME="Storable::" VERSION="2.05"/>
            <REQUIRE NAME="SOAP::Lite" VERSION=""/>
            <REQUIRE NAME="SVG::Graph" VERSION="0.01"/>
            <REQUIRE NAME="Bio::ASN1::EntrezGene" VERSION=""/>
            <REQUIRE NAME="HTML::Entities" VERSION=""/>
            <REQUIRE NAME="GraphViz::" VERSION=""/>
            <REQUIRE NAME="XML::Parser" VERSION=""/>
            <REQUIRE NAME="Array::Compare" VERSION=""/>
            <REQUIRE NAME="List::MoreUtils" VERSION=""/>
            <REQUIRE NAME="Convert::Binary::C" VERSION=""/>
            <REQUIRE NAME="Algorithm::Munkres" VERSION=""/>
            <REQUIRE NAME="XML::Twig" VERSION=""/>
            <REQUIRE NAME="HTML::HeadParser" VERSION="3"/>
            <REQUIRE NAME="SVG::" VERSION="2.26"/>
            <REQUIRE NAME="HTTP::Request::Common" VERSION=""/>
            <REQUIRE NAME="Set::Scalar" VERSION=""/>
            <REQUIRE NAME="XML::Parser::PerlSAX" VERSION=""/>
            <REQUIRE NAME="LWP::UserAgent" VERSION=""/>
            <REQUIRE NAME="Text::ParseWords" VERSION=""/>
            <REQUIRE NAME="Spreadsheet::WriteExcel" VERSION=""/>
            <REQUIRE NAME="XML::Writer" VERSION="0.4"/>
            <REQUIRE NAME="Clone::" VERSION=""/>
            <REQUIRE NAME="XML::DOM::XPath" VERSION="0.13"/>
            <REQUIRE NAME="PostScript::TextBlock" VERSION=""/>
        </IMPLEMENTATION>
    </SOFTPKG>
</REPOSITORY>
