[Bioperl-announce-l] BLAT Howto?

Minh Bui buiduyminh at gmail.com
Mon Jun 28 09:09:05 EDT 2010


Hi everyone,
I am new to Bioperl and perl itself and running perl on window 7.

 My job is to develop an application that can search through a  database
with thousands of queries. BLAT is a  best option (if you know any other
algorithm that can do this, please let me know). I have been searching
through Bioperl BLAT documentation and there is only one document for BLAT
but without example.
I am wondering if anyone has done BLAT using Bioperl, please show me how to
use BLAT in  Bioperl.

Thank you very much and sorry for my english. Its not my first language.


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