Bioperl-guts: Global.pm errors?

Aaron J Mackey ajm6q@virginia.edu
Fri, 12 Mar 1999 09:35:11 -0500 (EST)


My Perl is pretty vanilla:

Summary of my perl5 (5.0 patchlevel 4 subversion 4) configuration:
  Platform:
    osname=linux, osvers=2.0.34, archname=i386-linux
    uname='linux porky.redhat.com 2.0.34 #1 thu may 7 10:17:44 edt 1998 i686 unknown '
    hint=recommended, useposix=true, d_sigaction=define
    bincompat3=y useperlio=undef d_sfio=undef
  Compiler:
    cc='cc', optimize='-O2', gccversion=2.7.2.3
    cppflags='-Dbool=char -DHAS_BOOL -I/usr/local/include'
    ccflags ='-Dbool=char -DHAS_BOOL -I/usr/local/include'
    stdchar='char', d_stdstdio=define, usevfork=false
    intsize=4, longsize=4, ptrsize=undef, doublesize=undef
    alignbytes=4, usemymalloc=n, prototype=define
  Linker and Libraries:
    ld='cc', ldflags =' -L/usr/local/lib'
    libpth=/usr/local/lib /lib /usr/lib
    libs=-lnsl -lndbm -lgdbm -ldb -ldl -lm -lc -lposix -lcrypt
    libc=, so=so
    useshrplib=false, libperl=libperl.a
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-rdynamic'
    cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'


Characteristics of this binary (from libperl): 
  Locally applied patches:
        MAINT_TRIAL_4 - 5.004_05 maintenance trial 4
  Built under linux
  Compiled at Sep 10 1998 02:16:22
  %ENV:
    PERLLIB="/home/ajm6q/perl/lib"
  @INC:
    /home/ajm6q/perl/lib
    /usr/lib/perl5/i386-linux/5.00404
    /usr/lib/perl5
    /usr/lib/perl5/site_perl/i386-linux
    /usr/lib/perl5/site_perl
    .


On Fri, 12 Mar 1999, Ewan Birney wrote:

> 
> It looks like a perl version series of bugs.
> 
> SteveC - have you updated stuff in there? What perl version are you
> on vs Aaron's?
> 
> 
> - Aaron - you might want to try to revert back while steve tracks
> that (if it is his bug). 
> 
> It shouldn't be serious, but we do need to solve it. ;)
> 
> 
> 
> Ewan Birney
> <birney@sanger.ac.uk>
> http://www.sanger.ac.uk/Users/birney/
> 
> 

 o ~   ~   ~   ~   ~   ~  o
/ Aaron J Mackey           \
\  Dr. Pearson Laboratory  / 
 \ University of Virginia  \     
 /  (804) 924-2821          \
 \  amackey@virginia.edu    /
  o ~   ~   ~   ~   ~   ~  o


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