Bioperl-guts: Corrections checked in

Jason Stajich jason@chg.mc.duke.edu
Tue, 14 Mar 2000 08:28:24 -0500 (EST)


Have updated and checked into CVS the following changes.
Renamed 
Bio::DB::RandomAccessDBI -> Bio::DB::RandomAccessI

(combined into one interface)
Bio::DB::SeqDBI          -> Bio::DB::SeqI
Bio::DB::BioSeqI         -> Bio::DB::SeqI

so I removed
Bio::DB::RandomAccessDBI
Bio::DB::SeqDBI
Bio::DB::BioSeqI

Made GenBank/GenPept instances of a RandomAccessI and Bio::Root::Object

Hope this can help get 0.6 out!  This seems a lot cleaner. 

Bio::DB modules:

            Bio::Root::RootI
 		   |
		   | 
	    	  \ /
	    Bio::DB::RandomAccessI   Bio::Root::Object
	   /	   |           \             |
	  /	   |            \            |
	\ /	  \ /           \/          \ /
Bio::DB::Ace   Bio::DB::SeqI   Bio::DB::GenBank/GenPept


Jason Stajich
Center for Human Genetics
Duke University Medical Center
jason@chg.mc.duke.edu
(919)684-1806





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