[Bioperl-guts-l] [Bug 1655] Bio::SearchIO::Writer::* and hmmpfam

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Jun 22 13:54:27 EDT 2004


http://bugzilla.open-bio.org/show_bug.cgi?id=1655





------- Additional Comments From jason at open-bio.org  2004-06-22 13:54 -------
An oversight I guess.  No one has tried to write HMMPFAM with it so I don't expect it to work since it 
doesn't have all the same information as BLAST. 

A patch in CVS now to allow it deal with HMMER output although don't expect the report to look perfect 
since a lot of the information that is seen in BLAST reports is not in the HMMER report.



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