[Bioperl-guts-l] bioperl commit

Brian Osborne bosborne at pub.open-bio.org
Tue May 25 10:13:28 EDT 2004


bosborne
Tue May 25 10:13:28 EDT 2004
Update of /home/repository/bioperl/bioperl-live/Bio/AlignIO
In directory pub.open-bio.org:/tmp/cvs-serv31490

Modified Files:
	po.pm 
Log Message:
POD errors

bioperl-live/Bio/AlignIO po.pm,1.1,1.2
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/AlignIO/po.pm,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/bioperl/bioperl-live/Bio/AlignIO/po.pm	2004/05/15 20:33:11	1.1
+++ /home/repository/bioperl/bioperl-live/Bio/AlignIO/po.pm	2004/05/25 14:13:28	1.2
@@ -1,10 +1,8 @@
 # $Id: po.pm
 #
 # BioPerl module for Bio::AlignIO::po
-
 #	based on the Bio::AlignIO::fasta module
 #       by Peter Schattner (and others?)
-#
 #       and the SimpleAlign.pm module of Ewan Birney
 #
 # You may distribute this module under the same terms as perl itself
@@ -65,7 +63,7 @@
  Title   : next_aln
  Usage   : $aln = $stream->next_aln()
  Function: returns the next alignment in the stream.
- Returns : L<Bio::Align::AlignI> object - returns undef on end of file
+ Returns : Bio::Align::AlignI object - returns undef on end of file
 	    or on error
  Args    : NONE
 
@@ -210,7 +208,7 @@
  Usage   : $stream->write_aln(@aln)
  Function: writes the $aln object into the stream in po format
  Returns : 1 for success and 0 for error
- Args    : L<Bio::Align::AlignI> object
+ Args    : Bio::Align::AlignI object
 
 =cut
 



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