[Bioperl-guts-l] [Bug 1889] New: Matrix::Generic method remove_row needs to remap rows

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Nov 1 17:57:29 EST 2005


http://bugzilla.open-bio.org/show_bug.cgi?id=1889

           Summary: Matrix::Generic  method remove_row needs to remap rows
           Product: Bioperl
           Version: 1.5 branch
          Platform: PC
        OS/Version: All
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Unclassified
        AssignedTo: bioperl-guts-l at bioperl.org
        ReportedBy: wiersmap at agr.gc.ca


Bio::Matrix::Generic
Used remove_row() to remove row 2 of a 7 row matrix.  The resulting matrix was
correct but the map %{$self->{'_rownamesmap'} was not updated so subsequent
calls to method row() addressed the wrong rows for rows after 2.

I copied over the mapping routines from methods add_row() and add_column()
[also in Matrix::Generic] and that seems to work fine.




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