[Bioperl-guts-l] bioperl-live/Bio/LiveSeq AARange.pm, 1.11, 1.12 Chain.pm, 1.14, 1.15 ChainI.pm, 1.12, 1.13 DNA.pm, 1.10, 1.11 Exon.pm, 1.9, 1.10 Gene.pm, 1.14, 1.15 Intron.pm, 1.8, 1.9 Mutation.pm, 1.8, 1.9 Mutator.pm, 1.28, 1.29 Prim_Transcript.pm, 1.8, 1.9 Range.pm, 1.8, 1.9 Repeat_Region.pm, 1.8, 1.9 Repeat_Unit.pm, 1.8, 1.9 SeqI.pm, 1.27, 1.28 Transcript.pm, 1.19, 1.20 Translation.pm, 1.14, 1.15

Heikki Lehvaslaiho heikki at pub.open-bio.org
Thu Nov 17 04:54:49 EST 2005


Update of /home/repository/bioperl/bioperl-live/Bio/LiveSeq
In directory pub.open-bio.org:/tmp/cvs-serv10019/Bio/LiveSeq

Modified Files:
	AARange.pm Chain.pm ChainI.pm DNA.pm Exon.pm Gene.pm Intron.pm 
	Mutation.pm Mutator.pm Prim_Transcript.pm Range.pm 
	Repeat_Region.pm Repeat_Unit.pm SeqI.pm Transcript.pm 
	Translation.pm 
Log Message:
I'll be using bioperl.org mail address from now on documents


Index: AARange.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/AARange.pm,v
retrieving revision 1.11
retrieving revision 1.12
diff -C2 -d -r1.11 -r1.12
*** AARange.pm	4 Jun 2003 08:36:40 -0000	1.11
--- AARange.pm	17 Nov 2005 09:54:47 -0000	1.12
***************
*** 75,84 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 75,78 ----

Index: Repeat_Unit.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Repeat_Unit.pm,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** Repeat_Unit.pm	4 Jun 2003 08:36:40 -0000	1.8
--- Repeat_Unit.pm	17 Nov 2005 09:54:47 -0000	1.9
***************
*** 29,38 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 29,32 ----

Index: Range.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Range.pm,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** Range.pm	4 Jun 2003 08:36:40 -0000	1.8
--- Range.pm	17 Nov 2005 09:54:47 -0000	1.9
***************
*** 27,36 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 27,30 ----

Index: SeqI.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/SeqI.pm,v
retrieving revision 1.27
retrieving revision 1.28
diff -C2 -d -r1.27 -r1.28
*** SeqI.pm	9 Oct 2005 14:53:13 -0000	1.27
--- SeqI.pm	17 Nov 2005 09:54:47 -0000	1.28
***************
*** 56,65 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 56,59 ----

Index: Repeat_Region.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Repeat_Region.pm,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** Repeat_Region.pm	4 Jun 2003 08:36:40 -0000	1.8
--- Repeat_Region.pm	17 Nov 2005 09:54:47 -0000	1.9
***************
*** 29,38 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, Regioned Kingdom 
- 
  =head1 APPENDIX
  
--- 29,32 ----

Index: DNA.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/DNA.pm,v
retrieving revision 1.10
retrieving revision 1.11
diff -C2 -d -r1.10 -r1.11
*** DNA.pm	4 Jun 2003 08:36:40 -0000	1.10
--- DNA.pm	17 Nov 2005 09:54:47 -0000	1.11
***************
*** 28,37 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 28,31 ----

Index: ChainI.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/ChainI.pm,v
retrieving revision 1.12
retrieving revision 1.13
diff -C2 -d -r1.12 -r1.13
*** ChainI.pm	9 Oct 2005 14:53:13 -0000	1.12
--- ChainI.pm	17 Nov 2005 09:54:47 -0000	1.13
***************
*** 51,59 ****
  
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
  
  =head1 APPENDIX
--- 51,54 ----

Index: Intron.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Intron.pm,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** Intron.pm	4 Jun 2003 08:36:40 -0000	1.8
--- Intron.pm	17 Nov 2005 09:54:47 -0000	1.9
***************
*** 29,38 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 29,32 ----

Index: Gene.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Gene.pm,v
retrieving revision 1.14
retrieving revision 1.15
diff -C2 -d -r1.14 -r1.15
*** Gene.pm	4 Jun 2003 08:36:40 -0000	1.14
--- Gene.pm	17 Nov 2005 09:54:47 -0000	1.15
***************
*** 27,36 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 27,30 ----

Index: Exon.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Exon.pm,v
retrieving revision 1.9
retrieving revision 1.10
diff -C2 -d -r1.9 -r1.10
*** Exon.pm	4 Jun 2003 08:36:40 -0000	1.9
--- Exon.pm	17 Nov 2005 09:54:47 -0000	1.10
***************
*** 29,38 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 29,32 ----

Index: Translation.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Translation.pm,v
retrieving revision 1.14
retrieving revision 1.15
diff -C2 -d -r1.14 -r1.15
*** Translation.pm	6 Jun 2003 12:48:08 -0000	1.14
--- Translation.pm	17 Nov 2005 09:54:47 -0000	1.15
***************
*** 30,39 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 30,33 ----

Index: Mutation.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Mutation.pm,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** Mutation.pm	9 Oct 2005 14:53:13 -0000	1.8
--- Mutation.pm	17 Nov 2005 09:54:47 -0000	1.9
***************
*** 3,7 ****
  # BioPerl module for Bio::LiveSeq::Mutation
  #
! # Cared for by Heikki Lehvaslaiho <heikki at ebi.ac.uk>
  #
  # Copyright Heikki Lehvaslaiho
--- 3,7 ----
  # BioPerl module for Bio::LiveSeq::Mutation
  #
! # Cared for by Heikki Lehvaslaiho <heikki-at-bioperl-dot-org>
  #
  # Copyright Heikki Lehvaslaiho
***************
*** 79,88 ****
  =head1 AUTHOR - Heikki Lehvaslaiho
  
! Email:  heikki at ebi.ac.uk
! Address: 
! 
!      EMBL Outstation, European Bioinformatics Institute
!      Wellcome Trust Genome Campus, Hinxton
!      Cambs. CB10 1SD, United Kingdom 
  
  =head1 APPENDIX
--- 79,83 ----
  =head1 AUTHOR - Heikki Lehvaslaiho
  
! Email:  heikki-at-bioperl-dot-org
  
  =head1 APPENDIX

Index: Prim_Transcript.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Prim_Transcript.pm,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** Prim_Transcript.pm	4 Jun 2003 08:36:40 -0000	1.8
--- Prim_Transcript.pm	17 Nov 2005 09:54:47 -0000	1.9
***************
*** 29,38 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 29,32 ----

Index: Mutator.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Mutator.pm,v
retrieving revision 1.28
retrieving revision 1.29
diff -C2 -d -r1.28 -r1.29
*** Mutator.pm	9 Oct 2005 14:53:13 -0000	1.28
--- Mutator.pm	17 Nov 2005 09:54:47 -0000	1.29
***************
*** 3,7 ****
  # bioperl module for Bio::LiveSeq::Mutator
  #
! # Cared for by Heikki Lehvaslaiho <heikki at ebi.ac.uk>
  #
  # Copyright Joseph Insana
--- 3,7 ----
  # bioperl module for Bio::LiveSeq::Mutator
  #
! # Cared for by Heikki Lehvaslaiho <heikki-at-bioperl-dot-org>
  #
  # Copyright Joseph Insana
***************
*** 57,68 ****
  =head1 AUTHOR - Heikki Lehvaslaiho & Joseph A.L. Insana
  
!   Email:  heikki at ebi.ac.uk
            insana at ebi.ac.uk, jinsana at gmx.net
- 
-   Address:
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom
  
  =head1 APPENDIX
--- 57,62 ----
  =head1 AUTHOR - Heikki Lehvaslaiho & Joseph A.L. Insana
  
!   Email:  heikki-at-bioperl-dot-org
            insana at ebi.ac.uk, jinsana at gmx.net
  
  =head1 APPENDIX

Index: Transcript.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Transcript.pm,v
retrieving revision 1.19
retrieving revision 1.20
diff -C2 -d -r1.19 -r1.20
*** Transcript.pm	4 Jun 2003 08:36:40 -0000	1.19
--- Transcript.pm	17 Nov 2005 09:54:47 -0000	1.20
***************
*** 29,38 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 29,32 ----

Index: Chain.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/Chain.pm,v
retrieving revision 1.14
retrieving revision 1.15
diff -C2 -d -r1.14 -r1.15
*** Chain.pm	4 Jun 2003 08:36:40 -0000	1.14
--- Chain.pm	17 Nov 2005 09:54:47 -0000	1.15
***************
*** 51,60 ****
  Email:  Insana at ebi.ac.uk, jinsana at gmx.net
  
- Address: 
- 
-      EMBL Outstation, European Bioinformatics Institute
-      Wellcome Trust Genome Campus, Hinxton
-      Cambs. CB10 1SD, United Kingdom 
- 
  =head1 APPENDIX
  
--- 51,54 ----



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