[Bioperl-guts-l] bioperl-run/Bio/Tools/Run/Phylo/Phylip ProtPars.pm, 1.18, 1.19

[Jason Stajich]

Update of /home/repository/bioperl/bioperl-run/Bio/Tools/Run/Phylo/Phylip
In directory pub.open-bio.org:/tmp/cvs-serv4087/Bio/Tools/Run/Phylo/Phylip

Modified Files:
	ProtPars.pm 
Log Message:
do the right thing that I wanted you to do (you know that thing)


Index: ProtPars.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-run/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm,v
retrieving revision 1.18
retrieving revision 1.19
diff -C2 -d -r1.18 -r1.19
*** ProtPars.pm	22 Sep 2005 19:26:44 -0000	1.18
--- ProtPars.pm	30 Sep 2005 01:21:56 -0000	1.19
***************
*** 419,425 ****
      $self = shift;
      my $param_string = "";
!     my %menu = %{$Bio::Tools::Run::Phylo::Phylip::PhylipConf::Menu->{$self->version}->{'PROTPARS'}};
  
! 	  for $attr ( @PROTPARS_PARAMS) {
          $value = $self->$attr();
          next unless (defined $value);
--- 419,426 ----
      $self = shift;
      my $param_string = "";
!     
!     my %menu = %{$Bio::Tools::Run::Phylo::Phylip::PhylipConf::Menu{$self->version}->{'PROTPARS'}};
  
!     for $attr ( @PROTPARS_PARAMS) {
          $value = $self->$attr();
          next unless (defined $value);