[Bioperl-guts-l] bioperl-live/t genbank.t,1.10,1.11

Senduran Balasubramaniam sendu at dev.open-bio.org
Fri Aug 18 06:54:04 EDT 2006


Update of /home/repository/bioperl/bioperl-live/t
In directory dev.open-bio.org:/tmp/cvs-serv16055/t

Modified Files:
	genbank.t 
Log Message:
fixed handling of organism lines split over 2 lines and creation of classification array when multi-word name is split over 2 lines

Index: genbank.t
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/t/genbank.t,v
retrieving revision 1.10
retrieving revision 1.11
diff -C2 -d -r1.10 -r1.11
*** genbank.t	12 Aug 2006 11:00:02 -0000	1.10
--- genbank.t	18 Aug 2006 10:54:02 -0000	1.11
***************
*** 10,14 ****
  	}
  	use Test;
! 	plan tests => 128;
  }
  
--- 10,14 ----
  	}
  	use Test;
! 	plan tests => 129;
  }
  
***************
*** 345,348 ****
--- 345,349 ----
  $seq = $gb->next_seq;
  ok $seq->species->common_name, "Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150";
+ ok $seq->species->scientific_name, "Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150";
  @class = $seq->species->classification;
  ok $class[$#class], "Bacteria";



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