[Bioperl-guts-l] bioperl-live/Bio/PopGen Statistics.pm,1.30,1.31

Jason Stajich jason at pub.open-bio.org
Sat Feb 11 10:46:34 EST 2006

Update of /home/repository/bioperl/bioperl-live/Bio/PopGen
In directory pub.open-bio.org:/tmp/cvs-serv25427/Bio/PopGen

Modified Files:
Log Message:
added F* which was present but not listed here

Index: Statistics.pm
RCS file: /home/repository/bioperl/bioperl-live/Bio/PopGen/Statistics.pm,v
retrieving revision 1.30
retrieving revision 1.31
diff -C2 -d -r1.30 -r1.31
*** Statistics.pm	30 Nov 2005 16:16:09 -0000	1.30
--- Statistics.pm	11 Feb 2006 15:46:32 -0000	1.31
*** 78,85 ****
--- 78,88 ----
   Fu and Li's D*   (fu_and_li_D_star)
   Fu and Li's F    (fu_and_li_F)
+  Fu and Li's F*   (fu_and_li_F_star)
   Tajima's D       (tajima_D)
   Watterson's theta (theta)
   pi               (pi) - number of pairwise differences
   composite_LD     (composite_LD)
+ Count based methods also exist in case you have already calculated the key statistics (seg sites, num individuals, etc) and just want to compute the statistic.
  In all cases where a the method expects an arrayref of

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