March 2006 Archives by subject

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Starting: Wed Mar 1 14:15:18 EDT 2006
Ending: Fri Mar 31 13:59:02 EDT 2006
Messages: 73

• [Bioperl-guts-l] [Bug 1975] New: request to add "-validate" option to Bio::Species->new()   bugzilla-daemon at newportal.open-bio.org
• [Bioperl-guts-l] [Bug 1977] error parsing psl using Bio::SearchIO::psl   bugzilla-daemon at newportal.open-bio.org
• [Bioperl-guts-l] [Bug 1977] New: error parsing psl using Bio::SearchIO::psl   bugzilla-daemon at newportal.open-bio.org
• [Bioperl-guts-l] bioperl-db INSTALL,1.12,1.13   Brian Osborne
• [Bioperl-guts-l] bioperl-ext/Bio/Ext/Align Align.xs,1.6,1.7   Yee Man Chan
• [Bioperl-guts-l] bioperl-ext/Bio/Ext/Align/libs dpalign.c,1.3,1.4   Yee Man Chan
• [Bioperl-guts-l] bioperl-ext/Bio/Ext/HMM hmmlib.c,1.3,1.4   Yee Man Chan
• [Bioperl-guts-l] bioperl-live bptutorial.pl,1.164,1.165   Brian Osborne
• [Bioperl-guts-l] bioperl-live DEPRECATED,1.5,1.6   Brian Osborne
• [Bioperl-guts-l] bioperl-live INSTALL, 1.42, 1.43 Makefile.PL, 1.88, 1.89   Malcom Cook
• [Bioperl-guts-l] bioperl-live Makefile.PL,1.89,1.90   Torsten Seemann
• [Bioperl-guts-l] bioperl-live Makefile.PL,1.90,1.91   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio AlignIO.pm,1.40,1.41   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio FeatureIO.pm,1.9,1.10   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio SimpleAlign.pm,1.98,1.99   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio SimpleAlign.pm,1.99,1.100   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio WebAgent.pm,1.9,1.10   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio/AlignIO fasta.pm,1.22,1.23   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/DB GDB.pm,1.16,1.17   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/DB GFF.pm,1.137,1.138   Lincoln Stein
• [Bioperl-guts-l] bioperl-live/Bio/DB MeSH.pm,1.4,1.5   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/DB NCBIHelper.pm,1.43,1.44   Christopher John Fields
• [Bioperl-guts-l] bioperl-live/Bio/DB NCBIHelper.pm,1.44,1.45   Christopher John Fields
• [Bioperl-guts-l] bioperl-live/Bio/DB WebDBSeqI.pm, 1.48, 1.49 SeqHound.pm, 1.1, 1.2 GDB.pm, 1.15, 1.16   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio/FeatureIO gff.pm,1.37,1.38   Scott Cain
• [Bioperl-guts-l] bioperl-live/Bio/Graphics/Glyph image.pm,1.1,1.2   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio/Location Split.pm,1.39,1.40   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/PopGen/IO hapmap.pm,1.5,1.6   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/Search SearchUtils.pm,1.14,1.15   Steve Chervitz
• [Bioperl-guts-l] bioperl-live/Bio/Search/Result ResultI.pm, 1.19, 1.20   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/SearchIO/Writer ResultTableWriter.pm, 1.14, 1.15   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/SearchIO/Writer HitTableWriter.pm, 1.15, 1.16   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/SeqFeature Generic.pm,1.96,1.97   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio/SeqIO entrezgene.pm,1.17,1.18   Stefan Kirov
• [Bioperl-guts-l] bioperl-live/Bio/SeqIO genbank.pm,1.125,1.126   Christopher John Fields
• [Bioperl-guts-l] bioperl-live/Bio/SeqIO genbank.pm,1.126,1.127   Christopher John Fields
• [Bioperl-guts-l] bioperl-live/Bio/SeqIO strider.pm, NONE, 1.1 lasergene.pm, NONE, 1.1   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/Tools Blast.pm,1.32,1.33   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/Tools EPCR.pm,1.12,1.13   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/Tools EPCR.pm,1.13,1.14   Malcom Cook
• [Bioperl-guts-l] bioperl-live/Bio/Tools WebBlat.pm,1.3,1.4   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio/Tools/Analysis/DNA ESEfinder.pm, 1.8, 1.9   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/Bio/Tools/Run RemoteBlast.pm, 1.28, 1.29   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/Tools/Run StandAloneBlast.pm, 1.54, 1.55   Brian Osborne
• [Bioperl-guts-l] bioperl-live/Bio/Tree Compatible.pm,1.2,1.3   Gabriel Valiente
• [Bioperl-guts-l] bioperl-live/Bio/Tree Node.pm,1.44,1.45   Jason Stajich
• [Bioperl-guts-l] bioperl-live/Bio/Tree Node.pm,1.45,1.46   Gabriel Valiente
• [Bioperl-guts-l] bioperl-live/scripts/Bio-DB-GFF bulk_load_gff.PLS, 1.37, 1.38 fast_load_gff.PLS, 1.27, 1.28   Lincoln Stein
• [Bioperl-guts-l] bioperl-live/scripts/Bio-DB-GFF bulk_load_gff.PLS, 1.38, 1.39   Lincoln Stein
• [Bioperl-guts-l] bioperl-live/scripts/Bio-DB-GFF bulk_load_gff.PLS, 1.39, 1.40   Lincoln Stein
• [Bioperl-guts-l] bioperl-live/scripts/Bio-DB-GFF bulk_load_gff.PLS, 1.40, 1.41 fast_load_gff.PLS, 1.28, 1.29   Lincoln Stein
• [Bioperl-guts-l] bioperl-live/scripts/searchio parse_hmmsearch.PLS, NONE, 1.1   Brian Osborne
• [Bioperl-guts-l] bioperl-live/scripts/seq seqconvert.PLS,1.5,1.6   Torsten Seemann
• [Bioperl-guts-l] bioperl-live/scripts/utilities remote_blast.PLS, 1.4, 1.5   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t AlignIO.t,1.57,1.58   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t BioDBGFF.t,1.40,1.41   Lincoln Stein
• [Bioperl-guts-l] bioperl-live/t Compatible.t,1.2,1.3   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t DB.t,1.55,1.56   Christopher John Fields
• [Bioperl-guts-l] bioperl-live/t DB.t,1.56,1.57   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t DB.t,1.57,1.58   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t DB.t,1.58,1.59   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t ePCR.t,1.1,1.2   Malcom Cook
• [Bioperl-guts-l] bioperl-live/t genbank.t,1.3,1.4   Christopher John Fields
• [Bioperl-guts-l] bioperl-live/t MeSH.t,1.4,1.5   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t MeSH.t,1.5,1.6   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t SearchIO.t,1.92,1.93   Steve Chervitz
• [Bioperl-guts-l] bioperl-live/t SimpleAlign.t,1.39,1.40   Brian Osborne
• [Bioperl-guts-l] bioperl-live/t/data genomic-seq.epcr,1.1,1.2   Malcom Cook
• [Bioperl-guts-l] bioperl-live/t/data O_sat.wgs,NONE,1.1   Christopher John Fields
• [Bioperl-guts-l] bioperl-run/Bio/Tools/Run Vista.pm,1.10,1.11   Shawn Hoon
• [Bioperl-guts-l] bioperl-run/scripts multi_hmmsearch.PLS,NONE,1.1   Brian Osborne
• [Bioperl-guts-l] help test the new open-bio anonymous source code server   Mauricio Herrera Cuadra
• [Bioperl-guts-l] help test the new open-bio anonymous source code server   Chris Dagdigian

Last message date: Fri Mar 31 13:59:02 EDT 2006
Archived on: Fri Mar 31 13:59:51 EDT 2006

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