[Bioperl-guts-l] bioperl-live/t genbank.t,1.13,1.14

Senduran Balasubramaniam sendu at dev.open-bio.org
Mon Sep 4 07:19:48 EDT 2006


Update of /home/repository/bioperl/bioperl-live/t
In directory dev.open-bio.org:/tmp/cvs-serv4488/t

Modified Files:
	genbank.t 
Log Message:
fixes for binomial, species when creating a Bio::Species from a db; merges scientific_name now

Index: genbank.t
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/t/genbank.t,v
retrieving revision 1.13
retrieving revision 1.14
diff -C2 -d -r1.13 -r1.14
*** genbank.t	27 Aug 2006 23:55:56 -0000	1.13
--- genbank.t	4 Sep 2006 11:19:45 -0000	1.14
***************
*** 79,83 ****
                                                         "NC_006346.gb"));
  $as = $ast->next_seq;
! ok $as->species->binomial,'Bolitoglossa n. sp. RLM-2004';
  @class = $as->species->classification;
  ok($class[$#class],'Eukaryota');
--- 79,83 ----
                                                         "NC_006346.gb"));
  $as = $ast->next_seq;
! ok $as->species->binomial('FULL'), 'Bolitoglossa n. sp. RLM-2004';
  @class = $as->species->classification;
  ok($class[$#class],'Eukaryota');



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