[Bioperl-guts-l] bioperl-live/Bio/LiveSeq/IO BioPerl.pm, 1.20, 1.21 Loader.pm, 1.19, 1.20

Senduran Balasubramaniam sendu at dev.open-bio.org
Tue Sep 26 18:03:10 EDT 2006


Update of /home/repository/bioperl/bioperl-live/Bio/LiveSeq/IO
In directory dev.open-bio.org:/tmp/cvs-serv29288/Bio/LiveSeq/IO

Modified Files:
	BioPerl.pm Loader.pm 
Log Message:
use base, return true

Index: Loader.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/IO/Loader.pm,v
retrieving revision 1.19
retrieving revision 1.20
diff -C2 -d -r1.19 -r1.20
*** Loader.pm	13 Jan 2006 09:51:59 -0000	1.19
--- Loader.pm	26 Sep 2006 22:03:08 -0000	1.20
***************
*** 42,46 ****
  use strict;
  use Carp qw(cluck croak carp);
- use vars qw(@ISA);
  use Bio::LiveSeq::DNA;
  use Bio::LiveSeq::Exon;
--- 42,45 ----
***************
*** 55,60 ****
  use Bio::Tools::CodonTable;
  
- #@ISA=qw(Bio::LiveSeq::); # not useful now
- 
  =head2 entry2liveseq
  
--- 54,57 ----

Index: BioPerl.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/IO/BioPerl.pm,v
retrieving revision 1.20
retrieving revision 1.21
diff -C2 -d -r1.20 -r1.21
*** BioPerl.pm	7 Jun 2006 09:54:51 -0000	1.20
--- BioPerl.pm	26 Sep 2006 22:03:08 -0000	1.21
***************
*** 85,89 ****
  use strict;
  use Carp qw(cluck croak carp);
! use vars qw(@ISA $DBEMBLLOADED);
  use Bio::SeqIO; # for -file entry loading
  
--- 85,89 ----
  use strict;
  use Carp qw(cluck croak carp);
! use vars qw($DBEMBLLOADED);
  use Bio::SeqIO; # for -file entry loading
  
***************
*** 95,101 ****
  };
  
- use Bio::LiveSeq::IO::Loader;
  
! @ISA=qw(Bio::LiveSeq::IO::Loader);
  
  # This package can in the future host other databases loading subroutines.
--- 95,100 ----
  };
  
  
! use base qw(Bio::LiveSeq::IO::Loader);
  
  # This package can in the future host other databases loading subroutines.



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