[Bioperl-guts-l] bioperl-live/Bio/LiveSeq/IO BioPerl.pm, 1.20, 1.21 Loader.pm, 1.19, 1.20
Senduran Balasubramaniam
sendu at dev.open-bio.org
Tue Sep 26 18:03:10 EDT 2006
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Update of /home/repository/bioperl/bioperl-live/Bio/LiveSeq/IO
In directory dev.open-bio.org:/tmp/cvs-serv29288/Bio/LiveSeq/IO
Modified Files:
BioPerl.pm Loader.pm
Log Message:
use base, return true
Index: Loader.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/IO/Loader.pm,v
retrieving revision 1.19
retrieving revision 1.20
diff -C2 -d -r1.19 -r1.20
*** Loader.pm 13 Jan 2006 09:51:59 -0000 1.19
--- Loader.pm 26 Sep 2006 22:03:08 -0000 1.20
***************
*** 42,46 ****
use strict;
use Carp qw(cluck croak carp);
- use vars qw(@ISA);
use Bio::LiveSeq::DNA;
use Bio::LiveSeq::Exon;
--- 42,45 ----
***************
*** 55,60 ****
use Bio::Tools::CodonTable;
- #@ISA=qw(Bio::LiveSeq::); # not useful now
-
=head2 entry2liveseq
--- 54,57 ----
Index: BioPerl.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/LiveSeq/IO/BioPerl.pm,v
retrieving revision 1.20
retrieving revision 1.21
diff -C2 -d -r1.20 -r1.21
*** BioPerl.pm 7 Jun 2006 09:54:51 -0000 1.20
--- BioPerl.pm 26 Sep 2006 22:03:08 -0000 1.21
***************
*** 85,89 ****
use strict;
use Carp qw(cluck croak carp);
! use vars qw(@ISA $DBEMBLLOADED);
use Bio::SeqIO; # for -file entry loading
--- 85,89 ----
use strict;
use Carp qw(cluck croak carp);
! use vars qw($DBEMBLLOADED);
use Bio::SeqIO; # for -file entry loading
***************
*** 95,101 ****
};
- use Bio::LiveSeq::IO::Loader;
! @ISA=qw(Bio::LiveSeq::IO::Loader);
# This package can in the future host other databases loading subroutines.
--- 95,100 ----
};
! use base qw(Bio::LiveSeq::IO::Loader);
# This package can in the future host other databases loading subroutines.
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- Next message: [Bioperl-guts-l] bioperl-live/Bio/Location Atomic.pm, 1.16, 1.17 AvWithinCoordPolicy.pm, 1.8, 1.9 CoordinatePolicyI.pm, 1.8, 1.9 Fuzzy.pm, 1.34, 1.35 FuzzyLocationI.pm, 1.21, 1.22 NarrowestCoordPolicy.pm, 1.11, 1.12 Simple.pm, 1.41, 1.42 Split.pm, 1.47, 1.48 SplitLocationI.pm, 1.19, 1.20 WidestCoordPolicy.pm, 1.10, 1.11
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