[Bioperl-guts-l] bioperl-live Build.PL,1.5.2.7,1.5.2.8
Senduran Balasubramaniam
sendu at dev.open-bio.org
Wed Feb 14 06:37:04 EST 2007
Update of /home/repository/bioperl/bioperl-live
In directory dev.open-bio.org:/tmp/cvs-serv19157
Modified Files:
Tag: branch-1-5-2
Build.PL
Log Message:
recommend XML::SAX 0.15, no need for Bundle::BioPerl::XMLSimple
Index: Build.PL
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Build.PL,v
retrieving revision 1.5.2.7
retrieving revision 1.5.2.8
diff -C2 -d -r1.5.2.7 -r1.5.2.8
*** Build.PL 23 Jan 2007 11:23:01 -0000 1.5.2.7
--- Build.PL 14 Feb 2007 11:37:02 -0000 1.5.2.8
***************
*** 64,73 ****
'XML::Parser' => '0/parsing xml/Bio::Biblio::IO::medlinexml',
'XML::Parser::PerlSAX' => '0/parsing xml/Bio::SeqIO::tinyseq,Bio::SeqIO::game::gameSubs,Bio::OntologyIO::InterProParser,Bio::ClusterIO::dbsnp',
! 'XML::SAX' => '0/parsing xml/Bio::SearchIO::blastxml,Bio::SeqIO::tigrxml,Bio::SeqIO::bsml_sax',
'XML::SAX::Writer' => '0/writing xml/Bio::SeqIO::tigrxml',
- # XML::Simple requires that XML::SAX::ExpatXS be installed prior to it if XML::SAX 0.14 (and therefore
- # XML::SAX::PurePerl) has been installed, as is likely here. We have a bundle that installs ExpatXS
- # and XML::Simple in that order to handle this problem
- 'Bundle::BioPerl::XMLSimple' => '1/parsing xml/Bio::DB::EUtilities',
'XML::Twig' => '0/parsing xml/Bio::Variation::IO::xml,Bio::DB::Taxonomy::entrez,Bio::DB::Biblio::eutils,Bio::Graph::IO::psi_xml',
'XML::Writer' => '0.4/parsing and writing xml/Bio::SeqIO::agave,Bio::SeqIO::game::gameWriter,Bio::SeqIO::chadoxml,Bio::SeqIO::tinyseq,Bio::Variation::IO::xml,Bio::SearchIO::Writer::BSMLResultWriter'
--- 64,69 ----
'XML::Parser' => '0/parsing xml/Bio::Biblio::IO::medlinexml',
'XML::Parser::PerlSAX' => '0/parsing xml/Bio::SeqIO::tinyseq,Bio::SeqIO::game::gameSubs,Bio::OntologyIO::InterProParser,Bio::ClusterIO::dbsnp',
! 'XML::SAX' => '0.15/parsing xml/Bio::SearchIO::blastxml,Bio::SeqIO::tigrxml,Bio::SeqIO::bsml_sax',
'XML::SAX::Writer' => '0/writing xml/Bio::SeqIO::tigrxml',
'XML::Twig' => '0/parsing xml/Bio::Variation::IO::xml,Bio::DB::Taxonomy::entrez,Bio::DB::Biblio::eutils,Bio::Graph::IO::psi_xml',
'XML::Writer' => '0.4/parsing and writing xml/Bio::SeqIO::agave,Bio::SeqIO::game::gameWriter,Bio::SeqIO::chadoxml,Bio::SeqIO::tinyseq,Bio::Variation::IO::xml,Bio::SearchIO::Writer::BSMLResultWriter'
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