[Bioperl-guts-l] bioperl-live/t AlignIO.t,1.72,1.73

Christopher John Fields cjfields at dev.open-bio.org
Tue Jan 16 14:37:38 EST 2007


Update of /home/repository/bioperl/bioperl-live/t
In directory dev.open-bio.org:/tmp/cvs-serv1899/t

Modified Files:
	AlignIO.t 
Log Message:
fix filehandle issue for NEXUS parsing

Index: AlignIO.t
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/t/AlignIO.t,v
retrieving revision 1.72
retrieving revision 1.73
diff -C2 -d -r1.72 -r1.73
*** AlignIO.t	16 Jan 2007 19:34:15 -0000	1.72
--- AlignIO.t	16 Jan 2007 19:37:36 -0000	1.73
***************
*** 10,14 ****
  	}
  	use Test::More;
! 	plan tests => 283;
  	use_ok('Bio::SimpleAlign');
  	use_ok('Bio::AlignIO');
--- 10,14 ----
  	}
  	use Test::More;
! 	plan tests => 285;
  	use_ok('Bio::SimpleAlign');
  	use_ok('Bio::AlignIO');
***************
*** 747,754 ****
  	'testaln.aln'       => 'clustalw',
  	'testaln.metafasta' => 'metafasta',
! 	#'testaln.nexus'     => 'nexus',
  	'testaln.po'        => 'po',
  	'testaln.xmfa'      => 'xmfa'
- 
   );
  
--- 747,753 ----
  	'testaln.aln'       => 'clustalw',
  	'testaln.metafasta' => 'metafasta',
! 	'testaln.nexus'     => 'nexus',
  	'testaln.po'        => 'po',
  	'testaln.xmfa'      => 'xmfa'
   );
  



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