[Bioperl-guts-l] bioperl-run/Bio/Tools/Run/Phylo/Hyphy Modeltest.pm, 1.2, 1.3

Albert Vilella avilella at dev.open-bio.org
Mon Jan 29 12:14:52 EST 2007


Update of /home/repository/bioperl/bioperl-run/Bio/Tools/Run/Phylo/Hyphy
In directory dev.open-bio.org:/tmp/cvs-serv31132

Modified Files:
	Modeltest.pm 
Log Message:
typo nh to newick


Index: Modeltest.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-run/Bio/Tools/Run/Phylo/Hyphy/Modeltest.pm,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** Modeltest.pm	17 Dec 2006 12:59:39 -0000	1.2
--- Modeltest.pm	29 Jan 2007 17:14:50 -0000	1.3
***************
*** 26,30 ****
  
    my $treeio = Bio::TreeIO->new(
!       -format => 'nh', -file => 't/data/hyphy1.tree');
  
    my $modeltest = new Bio::Tools::Run::Phylo::Hyphy::Modeltest();
--- 26,30 ----
  
    my $treeio = Bio::TreeIO->new(
!       -format => 'newick', -file => 't/data/hyphy1.tree');
  
    my $modeltest = new Bio::Tools::Run::Phylo::Hyphy::Modeltest();



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