[Bioperl-guts-l] bioperl-live/Bio/Tools/Signalp ExtendedSignalp.pm, 1.3, 1.4

Senduran Balasubramaniam sendu at dev.open-bio.org
Thu Jun 14 10:16:20 EDT 2007


Update of /home/repository/bioperl/bioperl-live/Bio/Tools/Signalp
In directory dev.open-bio.org:/tmp/cvs-serv22328/Bio/Tools/Signalp

Modified Files:
	ExtendedSignalp.pm 
Log Message:
removed bad "new Bio::Module" syntax, replaced with "Bio::Module->new"

Index: ExtendedSignalp.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/Tools/Signalp/ExtendedSignalp.pm,v
retrieving revision 1.3
retrieving revision 1.4
diff -C2 -d -r1.3 -r1.4
*** ExtendedSignalp.pm	27 Mar 2007 12:42:45 -0000	1.3
--- ExtendedSignalp.pm	14 Jun 2007 14:16:18 -0000	1.4
***************
*** 20,24 ****
   use Bio::Tools::Signalp::ExtendedSignalp;
   my $params = [qw(maxC maxY maxS meanS D)];
!  my $parser = new Bio::Tools::Signalp::ExtendedSignalp(-fh =>$filehandle
                                                         -factors => $params);
  
--- 20,24 ----
   use Bio::Tools::Signalp::ExtendedSignalp;
   my $params = [qw(maxC maxY maxS meanS D)];
!  my $parser = Bio::Tools::Signalp::ExtendedSignalp->new(-fh =>$filehandle
                                                         -factors => $params);
  
***************
*** 92,96 ****
  
   Title   : new
!  Usage   : my $obj = new Bio::Tools::Signalp::ExtendedSignalp();
   Function: Builds a new Bio::Tools::Signalp::ExtendedSignalp object
   Returns : Bio::Tools::Signalp::ExtendedSignalp
--- 92,96 ----
  
   Title   : new
!  Usage   : my $obj = Bio::Tools::Signalp::ExtendedSignalp->new();
   Function: Builds a new Bio::Tools::Signalp::ExtendedSignalp object
   Returns : Bio::Tools::Signalp::ExtendedSignalp



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