[Bioperl-guts-l] bioperl-live/Bio/DB EUtilities.pm, 1.44, 1.45 EUtilParameters.pm, 1.7, 1.8

Christopher John Fields cjfields at dev.open-bio.org
Wed Oct 17 23:34:56 EDT 2007


Update of /home/repository/bioperl/bioperl-live/Bio/DB
In directory dev.open-bio.org:/tmp/cvs-serv2304/Bio/DB

Modified Files:
	EUtilities.pm EUtilParameters.pm 
Log Message:
some tweaks

Index: EUtilParameters.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/DB/EUtilParameters.pm,v
retrieving revision 1.7
retrieving revision 1.8
diff -C2 -d -r1.7 -r1.8
*** EUtilParameters.pm	20 Aug 2007 01:01:45 -0000	1.7
--- EUtilParameters.pm	18 Oct 2007 03:34:53 -0000	1.8
***************
*** 190,193 ****
--- 190,194 ----
          -methods => [@PARAMS, qw(eutil history correspondence id_file)]);
      $self->eutil() || $self->eutil('efetch');
+     $self->tool() || $self->tool('bioperl');
      # set default retmode if not explicitly set    
      $self->set_default_retmode if (!$retmode);

Index: EUtilities.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/DB/EUtilities.pm,v
retrieving revision 1.44
retrieving revision 1.45
diff -C2 -d -r1.44 -r1.45
*** EUtilities.pm	20 Aug 2007 01:01:45 -0000	1.44
--- EUtilities.pm	18 Oct 2007 03:34:53 -0000	1.45
***************
*** 24,28 ****
  =head1 DESCRIPTION
  
! ...To be added!
  
  =head1 FEEDBACK
--- 24,29 ----
  =head1 DESCRIPTION
  
! This is a general webagent which posts and retrieves data to NCBI's eUtilities
! service using their CGI interface.  
  
  =head1 FEEDBACK
***************
*** 185,189 ****
   Title   : get_Parser
   Usage   : $agent->get_Parser;
!  Function: Parse HTTP::Response content/file/fh using defined parser
   Returns : The Bio::Tools::EUtilities parser used to parse the HTTP::Response
             content
--- 186,190 ----
   Title   : get_Parser
   Usage   : $agent->get_Parser;
!  Function: Retrieve the parser used for last agent request
   Returns : The Bio::Tools::EUtilities parser used to parse the HTTP::Response
             content



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