[Bioperl-guts-l] [Bug 2345] Get mappable sequence coords after removing alignment columns

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Dec 16 00:39:13 EST 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2345





------- Comment #1 from cjfields at bioperl.org  2008-12-16 00:39 EST -------
I have been thinking of a Bio::Seq which would emulate LocatableSeq, i.e. it
would have a LocatableSeq-like simple object instead of a PrimarySeq (gaps, etc
allowed), but the location would be stored in a 'source' SeqFeature (which
allows split locations or hierarchal locations in an unflattened SF).  


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.


More information about the Bioperl-guts-l mailing list