[Bioperl-guts-l] [Bug 2444] Bio::SearchIO blast signifance contains comma

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Feb 6 07:58:53 EST 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2444





------- Comment #5 from bernd at bio.vu.nl  2008-02-06 07:58 EST -------
With the newest code (06-02-08; revision 14492).
Significance is OK now:
$hsp->evalue, $hsp->expect, $hsp->significance give the same "Evalue" now

$hit->significance and $hit->expect give same output ($hit->evalue does not
exist)
$hit->score now is the same as $hit->raw_score

Remark: was $hsp->significance intended to return the $hit->significance or the
highest $hsp->evalue?


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