[Bioperl-guts-l] [14518] bioperl-network/trunk/README: Minor edits
Brian Osborne
bosborne at dev.open-bio.org
Wed Feb 20 11:11:21 EST 2008
Revision: 14518
Author: bosborne
Date: 2008-02-20 11:11:20 -0500 (Wed, 20 Feb 2008)
Log Message:
-----------
Minor edits
Modified Paths:
--------------
bioperl-network/trunk/README
Modified: bioperl-network/trunk/README
===================================================================
--- bioperl-network/trunk/README 2008-02-20 01:15:32 UTC (rev 14517)
+++ bioperl-network/trunk/README 2008-02-20 16:11:20 UTC (rev 14518)
@@ -68,7 +68,8 @@
and were called Bio::Graph*. Bio::Graph was copied to a separate package,
bioperl-network, and renamed Bio::Network. All of the modules were
revised and a new module, Interaction.pm, was added. The
-functionality of the PSI MI parser, IO/psi.pm, was enhanced.
+functionality of the PSI MI 1.0 parser was enhanced and a version
+2.5 parser was added.
Graph manipulation in the predecessor Bio::Graph was based on the
Bio::Graph::SimpleGraph module by Nat Goodman. The first release as a
@@ -81,7 +82,6 @@
The advantages to using Graph are that Bioperl developers are not
responsible for maintaining the code that actually handles graph
manipulation and there is more functionality in Graph than in SimpleGraph.
-
The disadvantage is that we now rely on others to keep the package bug-free.
-You must install version .80 or greater but even this version is not
+You must install version .80 of Graph, or greater, but even this version is not
completely bug-free (see the BUGS file in this package for details).
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