[Bioperl-guts-l] [Bug 3160] New: Bio::SearchIO::Writer::TextResultWriter does not output Algorithm and Algorithm Version information
bugzilla-daemon at portal.open-bio.org
bugzilla-daemon at portal.open-bio.org
Fri Dec 10 12:47:31 EST 2010
http://bugzilla.open-bio.org/show_bug.cgi?id=3160
Summary: Bio::SearchIO::Writer::TextResultWriter does not output
Algorithm and Algorithm Version information
Product: BioPerl
Version: main-trunk
Platform: PC
OS/Version: Windows XP
Status: NEW
Severity: normal
Priority: P2
Component: Bio::Search/Bio::SearchIO
AssignedTo: bioperl-guts-l at bioperl.org
ReportedBy: pcantalupo at gmail.com
The Bio::SearchIO::Writer::TextResultWriter does not start the output with the
Algorithm and Algorithm Version at the top of the Blast result. It starts with
the Reference section. This is a problem for the end user since that person
reading the output has no idea what algorithm (i.e. TBLASTX) was used to
generate the output.
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