[Bioperl-guts-l] [bioperl/bioperl-live] ef1d89: Fix uninitialized value error if called from outsi...

noreply at github.com noreply at github.com
Fri Nov 12 16:44:44 EST 2010


Branch: refs/heads/topic/tree_dbsqlite_memoryfix
Home:   https://github.com/bioperl/bioperl-live

Commit: ef1d89a7a99d875ac4fda1a777c33ad9c5697d6e
    https://github.com/bioperl/bioperl-live/commit/ef1d89a7a99d875ac4fda1a777c33ad9c5697d6e
Author: Hilmar Lapp <hlapp at drycafe.net>
Date:   2010-11-12 (Fri, 12 Nov 2010)

Changed paths:
  M Bio/TreeIO/TreeEventDBBuilder.pm

Log Message:
-----------
Fix uninitialized value error if called from outside (which apparently some parsers do).


Commit: 4514ce393a6728c262de81ecf2c8c300e8adfce9
    https://github.com/bioperl/bioperl-live/commit/4514ce393a6728c262de81ecf2c8c300e8adfce9
Author: Hilmar Lapp <hlapp at drycafe.net>
Date:   2010-11-12 (Fri, 12 Nov 2010)

Changed paths:
  M Bio/DB/Tree/Node.pm

Log Message:
-----------
Some cleanup, added bootstrap. Implemented children().


Commit: 91f2251600adc2ef699db31b797cf61afd339a2c
    https://github.com/bioperl/bioperl-live/commit/91f2251600adc2ef699db31b797cf61afd339a2c
Author: Hilmar Lapp <hlapp at drycafe.net>
Date:   2010-11-12 (Fri, 12 Nov 2010)

Changed paths:
  M Bio/DB/Tree/Store.pm
  M Bio/DB/Tree/Store/DBI/SQLite.pm
  M t/Tree/DB/TreeIO-DB.t

Log Message:
-----------
Implemented fetching nodes by parent, added tests whether trees are correctly inserted.




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