[Bioperl-guts-l] [Bug 3163] AssemblyIO takes too long (especially 454)

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=3163





------- Comment #11 from cjfields at bioperl.org  2011-01-11 11:57 EST -------
(In reply to comment #10)
> Thanks Florent.  I am curious what makes it go so slow, and now I know it's
> exponentially slow with increasing reads!

Almost sounds like an issue of prior results not being cached/memoized
somewhere important.


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.