Bioperl: Suggestions for Structure Object
Bent Nagstrup Johansen
Wed, 23 Dec 1998 09:57:22 +0100
> 1.Parse and output different structure file formats, at a
>minimum PDB but could include mmCIF, CML/XML, and other
The .mol2 format as used in Sybyl would also be very nice to have.
>Analyzing & Editing Structures
>6.Given sequence alignment, compute optimal structure
>superposition (produce a rotation/translation matrix and/or
Construct multimers based on monomers and transrot matrices.
Bent Nagstrup, M.Sc.
Research Unit for Molecular Medicine
Aarhus University Hospital
"A bus station is where the bus stops,
A train station is where the train stops,
On my desk I have a work station...."
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