Bioperl: SeqAlign BLAST parsing

Andreas Matern
Wed, 27 Oct 1999 15:35:03 -0400

With a local installation of the NCBI toolbox, one has the option of
creating SeqAlign output for blast results.  Although obviously not meant to
be human readable, the output does have the benefit of being more easily
parsed than the conventional BLAST output.  Are any groups out there using
the SeqAlign option of blastall?  Just wondering if I'm going down a
dead-end road that someone else has already traveled.



Andreas Matern
622 Rhodes Hall
Cornell Theory Center
Ithaca, NY 14853

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