[Bioperl-l] swiss.pm again :)
Tue, 01 Aug 2000 01:27:31 +0200
hi to everyone!
i'd say, Bio::SeqIO::swiss is getting better ;)
added suggestions from Andrew Su, who switched the
some Reference lines and the crc code from James Gilbert!
So now the only differences between a read swissprot and
a written swissprot are:
*) written DT Lines (Date) have no comments
(not stored in Annotation object)
*) Molecular Weight is different to original (?)
*) Line Breaks in entries that have more than one line
are for some reason a bit different
*) the RP line in References is not always equal, because
there are $ref->start / $ref->end, which store one
sequence section, but a line with multiple ones like
"RP SEQUENCE OF 1-250 AND 303-371 FROM N.A."
"RP SEQUENCE OF 1-250 FROM N.A."
(don't know what to do about that)
PS: test fails at SeqFeatureProducer which has no Blast.pm in