[Bioperl-l] Bioperl Documentation (PrimarySeq)

Jason Stajich jason@chg.mc.duke.edu
Mon, 18 Dec 2000 16:43:56 -0500 (EST)

-accession was phased out in the last release, my fault for not checking
the synopsis, thanks for alerting us.  This is fixed now.

On Mon, 18 Dec 2000, Marc Colosimo wrote:

> I just want to point out that there is an error in the POD for
> PrimarySeq. Under SYNOPSIS, making a seqobj from memory, the key
> -accession => 'X78121' is used. Well, that does not work. Under, new it
> is listed correctly as -accession_number => 'AL000012'. In 0.62 there is
> no documentation for new and I had to go look at the code to see what
> was up. Granted it was only a few minutes. But this is a case that the
> POD was wrong.
> I would bet that similar errors can be found in the  PODs. When updating
> the Bioperl Documentation, I guess care should be taken to make sure
> that what is written  is correct.
> Marc
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Jason Stajich
Center for Human Genetics
Duke University Medical Center