[Bioperl-l] position mapping

Ewan Birney birney@ebi.ac.uk
Thu, 13 Jul 2000 22:30:48 +0000 (GMT)

On Wed, 12 Jul 2000, Alex Rolfe wrote:

> Do either Bio::Tools::Blast::HSP or Bio::UnivAln have an easy way to map
> a position in one sequence to a position in another (or the other)
> sequence?  In particular, I'm blasting a sequence and then mapping a
> location in the query to the matches.
> If this feature doesn't exist, I have code to do it that I could add to
> HSP.

I don't believe so. Please supply (if possible diff -u vs the latest tree
of bioperl)

> Alex
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