Thu, 13 Jul 2000 22:38:07 +0000 (GMT)
On Wed, 12 Jul 2000, Jason Stajich wrote:
> In addition to Chris' email
> I also noticed that if you have a gb sequence file that does not have any
> features it will not read the sequence. I'm not sure if the COMMENT and
> FEATURE tag are required by thethe Genbank spec but this doesn't seem
> to be expected behavior.
Yup. GenBank parser is not in good shape.
I suspect that some of what chris is seeing is things not be transfered
from the branch to the main trunk.
Jason - if you have the time, could you check in this fix and see what's
up between the branches. If you don't do it I will try to get around to
> Added the following - can check it in if you agree.
> RCS file: /home/repository/bioperl/bioperl-live/Bio/SeqIO/genbank.pm,v
> retrieving revision 1.12
> diff -r1.12 genbank.pm
> > goto ORIGIN if( /^ORIGIN/ );
> > ORIGIN:
> Jason Stajich
> Center for Human Genetics
> Duke University Medical Center
> (919)684-1806 (office)
> (919)684-2275 (fax)
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