[Bioperl-l] Bio::Tools::BPlite

Lorenz Pollak lorenz@ist.org
Sat, 15 Jul 2000 12:57:36 +0200 (CEST)

> There is a massive advantage here, as alot of the systems in

Nice to hear! :-)

> Bio::Seq/Bio::SeqIO rely on things inherieting from Bio::SeqFeatureI - you
> should also set primary_tag and source_tag to sensible values.

for the query feature:
primary_tag = "blast_query"
source_tag = $report->query (ac, id or name supplied with the query)

for the sbjct feature:
primary_tag = "blast_sbjct"
source = $sbjct->name (ac, id, name of sbjct)

how about these?

> Have you added a BPLite specific test?

I will do that in the next days.
(along with adding docs and some minor 
enhancements like using hashed constructors 
in all three modules)

kind regards,