Bioperl: off topic Beowulf question
Fri, 3 Mar 2000 16:42:12 -0600 (CST)
Blast and other tools.
Saskatoon, Saskatchewan, Canada
Gene Expression Lab
On Fri, 3 Mar 2000, Keith Allen wrote:
> Hey folks,
> sorry to wade in with an off topic question, but I know this stuff
> central to what a lot of you think about, at least from time to time.
> considering putting together a Beowulf cluster as a dedicated Blast
> but we'd really like to talk to someone who's already done this to find
> what's worked well and what hasn't. Specifically we need to know how
> people are handling job scheduling and load balancing, what sort of
> measures were needed to compile Blast for the cluster, and any other
> tidbits anyone might have to share.
> We're planning to put NCBI Blast on this server, but we're very
> to know if there are folks who think WU-Blast is better suited.
> -Keith Allen
> Bioinformatics Scientist
> Paradigm Genetics
> RTP, NC
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