[Bioperl-l] PubMed retrieval

Nirav Merchant Nirav@public.arl.arizona.edu
Thu, 16 Nov 2000 09:04:19


I used the information provided by NCBI at 
http://www.ncbi.nlm.nih.gov:80/entrez/query/static/linking.html
with libwww perl to do searches.

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=PubMed&term=stim
ulate+lipid+degradation

regards,
Nirav
 


At 09:52 AM 11/16/2000 +0800, you wrote:
>you can try:
>
>1. http://emerge.ncsa.uiuc.edu/download.html
>Emerge software package including Gazelle which provides a Z39.50
interface to the 
>Pubmed database at NLM
>
>2. 
>http://www.perl.com/CPAN-local/modules/by-module/WWW/WWW-Search-PubMed.-1.0
.tar.gz    
> 
>PubMed.pm by Jim Smyser version 1.0
>
>3. http://www.pubcrawler.ie/
>PubCrawler, perl scripts to access the PubMed. 
>
>
>
>Lifeng Tian
>Bioinformatics Group
>BioRoad Gene Development Ltd.
>Shanghai, 200021
>P.R.China
>
>
> 00-11-15 19:09:00 
>>Is there a BioPerl module for PubMed retrieval?
>>
>>If so, can anybody show me a simple code that fetch all abstracts with a
>>keyword, say "stimulate lipid degradation" and put them under a file
>>directory?
>>
>>Thanks!
>>
>>Simon
>>
>>
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>
>                    
>
> lftian
> lftian@public2.sta.net.cn
>
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