[Bioperl-l] Bio::Tools::Blast::HTML questions
J. H. Park
Sat, 16 Sep 2000 05:35:13 +0100
> "Zhao, David [PRI]" wrote:
> It seems that nobody has had the same problem, or you guys think this is just
> not significant enough to be answered?
I think people did not have the same problem.
Usually parsing file is not a clear
problem with clear answer(also boring to
Can you tell me what the calling statement was
and the file you have?
> -----Original Message-----
> From: Zhao, David [PRI] [SMTP:DZhao1@prius.jnj.com]
> Sent: Thursday, September 14, 2000 2:15 PM
> To: 'Bio-Perl'
> Subject: [Bioperl-l] Bio::Tools::Blast::HTML questions
> Hi there,
> It seems HTML module doesn't recognize the genbank format below (with AU027194.1
> instead of AU027194)
> dbj|AU027194.1|AU027194 Rattus norvegicus, OTSUKA clone, OT17.21... 52 4e-06
> gb|G38038.1|G38038 D11Moh17 P1 (K. Mohlke) Mus musculus STS geno... 50 2e-05
> gb|AF167500.1|AF167500 Mus musculus chromosome 10 STS D10Jhu28, ... 48 6e-05
> dbj|AU048942.1|AU048942 Rattus norvegicus, OTSUKA clone, 789h12,... 46 2e-04
> dbj|AU028307.1|AU028307 Rattus norvegicus, OTSUKA clone, OT27.34... 46 2e-04
> gb|G36407.1|G36407 D2Arz6 C57BL/6 YAC library I from Research Ge... 40 0.015
> dbj|AU048712.1|AU048712 Rattus norvegicus, OTSUKA clone, 750b02,... 38 0.060
> dbj|AU048021.1|AU048021 Rattus norvegicus, OTSUKA clone, 521g08,... 38 0.060
> Has anybody had the same problem before, or any suggestion?
> David Zhao
> Drug Discovery IM&T
> The R.W.Johnson PRI
> 3210 Merryfield Row
> San Diego, CA 92121
> Tel: (858) 784-3184
"If I can't be the first author, I'm going
to take all my marbles and go home."
-- Psientist --