[Bioperl-l] BPlite as SeqAnalyisParserI

Hilmar Lapp hilmarl@yahoo.com
Mon, 19 Feb 2001 18:53:25 -0800

Jason Stajich wrote:
> I'm just going to return the HSPs so that BPlite next_feature will keep
> track of the Sbjct and when it exhausts the current Sbjct of all of its
> nextHSP calls I'll try and get a new Sbjct, when there are no more Sbjcts
> to get then the next_feature will return undef.
> This is the simpliest way to do this without major changes to the code,
> BPlite::Sbjct objects really don't hold any information other than the
> name of the query so it is useless to try and make them a SeqFeatureI.

Sounds good. My useless comment, as it's already done anyway :-)

Hilmar Lapp                              email: hlapp@gmx.net
GNF, San Diego, Ca. 92122                phone: +1 858 812 1757