[Bioperl-l] my todo list
Wed, 28 Feb 2001 09:28:21 -0500 (EST)
On Tue, 27 Feb 2001, Jason Stajich wrote:
> I am looking at the tempfile creation and cleanup, it seems to work in the
> test case I built in t/Tempfile.t, but I will try and investigate further.
> So later this afternoon I hope to close the following bugs off:
> - bug #246 (location parsing not working for certain cases with a
> specified seq_id)
> - tempfiles not being cleaned up properly.
Fixed, I had added an empty DESTROY method to Bio::Root::RootI, since
Bio::Root::RootI comes first in the ISA path for
Tools::Run::Alignment::Clustalw, that is the destroy method being used,
and thus tempfiles were not automatically cleaned up properly.
> - additional bugs for biocorba that Brad C has found. (these are in
> bioperl-corba-server code).
Not done, low priority, release should be done first. IMHO.
> Ewan appears to be looking at 5.004 issues. I can run some tests
> tomorrow to help there if you need it.
> All tests currently pass for me on perl 5.6.0, solaris. getting there...
I'm looking into the GDB issues. The 5.004 machine I have access
to doesn't have LWP right now so I can't test it completely.
> Jason Stajich
> Center for Human Genetics
> Duke University Medical Center
> Bioperl-l mailing list
Center for Human Genetics
Duke University Medical Center