[Bioperl-l] Reliability of get_Seq_by_gi

Rob Edwards redwards at utmem.edu
Mon Apr 5 22:56:04 EDT 2004

Did you capture the errors and do they make any sense?


On Apr 5, 2004, at 5:44 PM, Wes Barris wrote:

> Rob Edwards wrote:
>> Just a suggestion, but have you tried making sure that $seq exists 
>> before writing. Something like this should fix the problem:


>> You should capture all the failed sequences and then validate them in 
>> case there is some error with the Acc/GI (like they doesn't exist any 
>> more).
>> Rob
> Hi Rob,
> Your solution appears to have worked.  I was able to download sequences
> over night and my script was still running this morning -- the first 
> time
> it has ever done that.  Thanks.

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