[Bioperl-l] (no subject)

Sucheta Tripathy sutripa at vbi.vt.edu
Mon Aug 9 22:12:03 EDT 2004


I am trying to retrieve sequences from a genbank index file which I created 
using the script bp_index.pl
The scripts are obtained from the distribution.
It created the index file in the desirable location, however, when I try to 
fetch the sequence  with the script
bp_fetch.pl using:

perl bp_fetch.pl -acc genbank:BT015122

  don't get the sequence.

It says :
Sequence BT015122 in Database genbank is not present.

The sequence is there in the genbank data that I indexed.

Can anyone pl. specify where I might be going wrong.




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