[Bioperl-l] Re: Given a protein sequence (and its Genbank accession number), how to get the accession number of corresponding mRNA sequence?

Wuming Gong gongwuming at gmail.com
Fri Dec 3 05:56:05 EST 2004

Hi list, 

In fact, I wanna get the coding sequences of the given proteins. Can I
perform the job by tblastn the proteins to refseq databases followed
by extracting the CDS sequences according to the start and end locus
of CDS in the SeqFeature section ? Thanks.


On Fri, 3 Dec 2004 18:48:23 +0800, Wuming Gong <gongwuming at gmail.com> wrote:
> Hi list,
> Could you please give me some clues on how to map a protein sequences
> which accession number is already known to a mRNA sequences in
> GenBank?
> Thanks!
> Wuming

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