[Bioperl-l] Getting query start and end from blast table report

michael watson (IAH-C) michael.watson at bbsrc.ac.uk
Mon Dec 13 08:07:18 EST 2004


How do you access the start and end of hits parsed using SearchIO and
the "blasttable" format option?

>From the docs, as far as I can see, hit objects parsed this way do not
have HSP objects, but it is only hsp objects that have start and end

Anyone help?


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