[Bioperl-l] bio::graphics::panel under mod_perl

Sean Davis sdavis2 at mail.nih.gov
Thu Dec 16 18:15:02 EST 2004

Nope.  More testing--still a problem.


On Dec 16, 2004, at 6:13 PM, Sean Davis wrote:

> Sorry.  A reinstall of GD-2.19 over a fresh libgd-2.0.33 seems to have  
> fixed the problem.
> Sean
> On Dec 16, 2004, at 4:44 PM, Sean Davis wrote:
>> I know this is a very esoteric question, but here goes:
>> I have two scripts, one home-brewed (using bioperl-live from recent  
>> CVS), and gbrowse (1.62), both running under mod_perl (apache 1.3).   
>> Each has the same behavior--in some requests, seemingly at random,  
>> several colors become black.  I haven't been able to sort this out,  
>> but since it happens in gbrowse and my custom app using  
>> bio::graphics, I wonder if there is an issue there.  It could just as  
>> likely be gd or some other supporting package.  I guess I am  
>> wondering if anyone else has noticed these issues or how I might sort  
>> it out.  Note that these work fine as straight CGI.  Two files are  
>> attached (as I am behind a firewall, so can't show the sites....).   
>> The second has the correct color scheme.
>> Sean
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