[Bioperl-l] searchio scripts

Richard Rouse rrouse at biomail.ucsd.edu
Tue Feb 17 18:14:23 EST 2004

I recent installed bioperl-1.4 and am having problems with the blast report
parsers in /examples/searchio/

When I run:
perl hitwriter.pl blastreport
I get:

Using SearchIO->new()

0 Blast report(s) processed.
Output sent to file: >hitwriter.out

I get the same result with rawwriter.pl, hspwriter.pl and custom_writer.pl
although the htmlwriter.pl and the blast_example.pl work fine.

Has anyone else encountered this problem and figured out how to fix it?



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