[Bioperl-l] new sourforge project using bioperl: RFLP planner
felipew at users.sourceforge.net
Mon Jan 5 08:21:27 EST 2004
I wrote a program that helps to plan RFLP experiments:
It finds restriction enzymes that cut a set of homologue DNA sequences
in different ways and simulates the resulting gel- electrophoresis
image. The program helps you to find the crucial restriction enzymes
that characterize the population. With the electrophoresis simulation
it is easy to chose the restriction enzymes that show the best
polymorphism on the gel.
The program is written in perl, uses some modules of bioperl and the
GD-Library. The program should be platform independet, but is tested
only on Mac OS X, perl 5.8.0, bioperl 1.2.3.
Any comments are welcome, even those telling me where I should have
anounced this project.
project web site:
sourceforge web site:
Alignement and restriction
Term::ANSIColor #only for output a red nucleotide in cli, obsolete:)
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