[Bioperl-l] How to obtain the nucleotide coding sequence.
valentin_ruano at yahoo.es
Sun Jan 18 11:44:26 EST 2004
Given a full nucleotide sequence in EMBL format. I
would like to obtain the CDS corresponding
subsequence, that is, free of any non-coding trailing,
-leading or intron segments.
I see how it may be done using the splicing
information encoded in the (join(...)) CDS feature
value. However I'm wondering whether there is some
package that does it already; I do not what to
reinvent the wheel.
Any clues, where I can find shuch functionality?
thanks in advance, Valentin.
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