[Bioperl-l] Bio::SeqIO::tinyseq

Donald Jackson donald.jackson at bms.com
Tue Jan 27 20:54:28 EST 2004


I've uploaded Bio::SeqIO::tinyseq, a SeqIO module for parsing the NCBI TinySeq XML format to the bioperl cvs repository.  Currently, it only reads and writes 'fasta-like' information (accession, description, sequence, sequence type).  The DTD supports additional info (such as organism/TaxID) which I'm working on adding to formats that support this info.

Please let me know if you have questions, suggestions, and especially bugs...

Don Jackson
BMS Bioinformatics

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