[Bioperl-l] Bio::SearchIO::axt - getting summary field info

Jonathan Lim jlim at cmmt.ubc.ca
Fri Jan 30 10:29:27 EST 2004

I'm using Bio::SearchIO::axt to read an axt file and I want to get the values 
two chromosome name fields from the summary lines for each HSP in the axt 
file. I've figured out how to get all the other fields except this one. Which 
method do I call?

Also, is there a simply way, using bioperl, to convert this axt file to 
another format like fasta?

Jonathan Lim
Bioinformatics Software Developer
Wasserman Lab, Centre for Molecular Medicine and Therapeutics
University of British Columbia
Phone: (604) 875-2345 ext 7948
Email: jlim at cmmt.ubc.ca

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