[Bioperl-l] All-vs-all BLAST
richard sucgang phd
rsucgang at bcm.tmc.edu
Tue Jul 20 16:16:31 EDT 2004
At 10:52 AM -0400 7/20/04, Jason Stajich wrote:
>If you want to run blast I don't think you really need Bioperl.
I had to wait until someone more knowledgable like Jason said this.
The NCBI BLAST package includes a binary called blastclust that
automatically runs the all vs all comparison of a set of sequences
and divides them into clusters (which is the usual reason for running
such a comparison).
Richard Sucgang, PhD
(713) 798 7657
More information about the Bioperl-l