[Bioperl-l] blasting a huge amount of data
aditi9783 at yahoo.co.in
Sat Jun 5 11:47:49 EDT 2004
i have a very specific poblem.
i have to blast all protein coding genes of human Y chromosome (which are 76 in number) with genomes of 30 different species and find which human genes are conserved in Y and/or in non-Y chromosomes of those species.
other details, like the start and the end point of hit sequence with query gene,% similarity,the gene name and chromosome of hit(if available)is also desired.
all things are available on the blast result page but the gene and chromosome name are available only after you click at the hit sequence and its summary is displayed.so,how can that be included in the output?
i wish to do it using perl but i'm new to it.
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