[Bioperl-l] writing and parsing annotations
DTuckwell at f2g.com
Mon Jun 14 10:04:50 EDT 2004
I'm having a bit of a problem updating genome annotations. I am writing a script to map old in-house produced annotations onto new releases of genomes. I encounter a problem when the new release is reverse complement to the in-house version. Basicly I'm trying to find the Bio::Location or Bio::SeqFeature terms for "the complement" term that you get in the annotations for sequences so I can parse and change the annotation.
I'd be grateful for any help,
Dr. Danny Tuckwell
Head of Bioinformatics
PO Box 1
Tel: 44 161 606 7252
Fax: 44 161 785 1273
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